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Observational epidemiology

incidence_rates()
Calculate standardised incidence rates
expand_age_at_risk()
Lexis expansion of data by age-at-risk
heterogeneity()
Test for heterogeneity
trend()
Test for trend

Regression modelling

linear_model()
Estimate the association between an exposure and a continuous outcome
logistic_model()
Estimate the association between an exposure and a binary outcome
cox_model()
Estimate the association between an exposure and incident disease
linear_model_safely() logistic_model_safely() cox_model_safely()
Safe versions of regression model function
multiple_models()
Multiple linear, logistic or Cox proportional hazards regression models

Proteomics data

prepare_olink_meta_data()
Preparation of Olink meta data
prepare_somascan_meta_data()
Preparation of SomaScan meta data
prepare_olink_data()
Preparation of Olink protein data
prepare_somascan_data()
Prepare SomaScan protein data
prepare_proteomics_analysis_dataset()
Preparation of a proteomics analysis data set
summarise_continuous()
Summarise continuous variables

Data

ckbtools_baseline
Synthetic CKB baseline data for demoing functions
ckbtools_endpoints
Synthetic CKB endpoint data for demoing functions
ckbtools_endpoint_definitions
Synthetic CKB endpoint definitions data for demoing functions
ckbtools_ascertainments
Synthetic CKB ascertainment data for demoing functions
ckbtools_raw_olink_meta_data
Synthetic CKB Olink proteomics data for demoing functions
ckbtools_raw_olink_protein_data
Synthetic CKB Olink proteomics data for demoing functions
ckbtools_raw_somascan_meta_data
Synthetic CKB SomaScan proteomics data for demoing functions
ckbtools_raw_somascan_protein_data
Synthetic CKB SomaScan proteomics data for demoing functions
ckbtools_raw_somascan_sample_data
Synthetic CKB SomaScan proteomics data for demoing functions
ckbtools_participant_data
Synthetic CKB participant data for demoing functions